Warning! Below we presented data as both HTML interactive and pdf static plots. Since the data are large in some instances [e.g. cerebellum], the interactive version can not always load properly on some PCs. In such case, the pdf static may be used. If possible, we recommend using the Opera browser.
| Astrocytes Aqp4 Gpc5 - Apoe | Astrocytes Aqp4 Gpc5 - Tprkb | Astrocytes Slc1a3 Slc7a11 - Cped1 | Astrocytes Slc1a3 Slc7a11 - Ranbp3l | Bergmann Gdf10 Gria1 - Gria1 | |
|---|---|---|---|---|---|
| Xkr4 | 0.2160268 | 0.2216736 | 0.2404465 | 0.4221899 | 0.7699403 |
| Gm1992 | 0.0210700 | 0.0077600 | 0.0735336 | 0.0498822 | 0.1123058 |
| Gm37381 | 0.0166807 | 0.0128804 | 0.0215986 | 0.0082632 | 0.0170091 |
| Rp1 | 0.0498806 | 0.0614188 | 0.0074269 | 0.0249311 | 0.0491225 |
| Sox17 | 0.0048606 | 0.0053718 | 0.0000000 | 0.0000000 | 0.0061107 |
| Astrocytes Slc1a3 Apoe - Slc1a2 | Astrocytes Slc1a3 Grin2c - Slc1a2 | Astrocytes Slc1a3 Ptgds - Ptgds | Endothelial Cldn5 Flt1 - Bsg | GABAergic Npy Adarb2 - Grip1 | |
|---|---|---|---|---|---|
| Xkr4 | 2.717575 | 0.8348435 | 1.8546009 | 1.580576 | 6.8728476 |
| Gm1992 | 0.000000 | 0.0191590 | 0.1427593 | 0.000000 | 0.2583325 |
| Gm37381 | 0.000000 | 0.0237413 | 0.0000000 | 0.000000 | 0.0463138 |
| Rp1 | 0.000000 | 0.0432075 | 0.0000000 | 0.000000 | 0.0453302 |
| Sox17 | 0.000000 | 0.0000000 | 0.0000000 | 1.013113 | 0.0000000 |
| Astrocytes Slc1a3 Hepacam - Apoe | Astrocytes Slc1a3 Hepacam - Cst3 | Astrocytes Slc1a3 Hepacam - Slc1a3 | Astrocytes Slc1a3 Mertk - Gpc5 | Astrocytes Slc1a3 Plpp3 - Apoe | |
|---|---|---|---|---|---|
| Xkr4 | 3.4593642 | 3.1257874 | 3.006409 | 1.2922381 | 0.8926728 |
| Gm1992 | 1.4871213 | 1.4236178 | 1.233734 | 0.0549860 | 0.1668951 |
| Gm37381 | 0.0325659 | 0.0157422 | 0.000000 | 0.0000000 | 0.0000000 |
| Rp1 | 0.0381125 | 0.0136421 | 0.000000 | 0.0131356 | 0.0000000 |
| Sox17 | 0.0000000 | 0.0151990 | 0.000000 | 0.0000000 | 0.0000000 |
| Astrocytes Slc1a3 Car2 - Cd81 | Astrocytes Slc1a3 Car2 - Glul | Astrocytes Slc1a3 Gpc5 - Gpc5 | Astrocytes Slc1a3 Gpc5 - Slc1a3 | Dopaminergic Rxfp1 Ntng2 - Ntng2 | |
|---|---|---|---|---|---|
| Xkr4 | 4.4754240 | 5.0894768 | 0.8558702 | 0.7277140 | 6.0490904 |
| Gm1992 | 2.3226102 | 2.1724244 | 0.0320016 | 0.0000000 | 0.5854197 |
| Gm37381 | 0.0385550 | 0.0517933 | 0.0082961 | 0.0000000 | 0.0000000 |
| Rp1 | 0.0775233 | 0.0000000 | 0.0081012 | 0.0000000 | 0.0000000 |
| Sox17 | 0.0000000 | 0.0550306 | 0.0081034 | 0.0855263 | 0.0000000 |
| Astrocytes Aqp4 Apoe - Apoe | Astrocytes Slc1a3 Brinp3 - Cdh18 | Astrocytes Slc1a3 Brinp3 - Gpc5 | Astrocytes Slc1a3 Brinp3 - Hs3st4 | Astrocytes Slc1a3 Erbb4 - Cntnap2 | |
|---|---|---|---|---|---|
| Xkr4 | 0.8525836 | 5.4301929 | 4.8089745 | 5.3186612 | 6.0951426 |
| Gm1992 | 0.3703344 | 3.0330123 | 2.2403751 | 2.1420419 | 3.5548043 |
| Gm37381 | 0.0071477 | 0.0000000 | 0.0000000 | 0.0442252 | 0.0192348 |
| Rp1 | 0.0101238 | 0.0667335 | 0.0538529 | 0.0000000 | 0.1012159 |
| Sox17 | 0.0165821 | 0.0329424 | 0.0000000 | 0.0463407 | 0.0000000 |
| Astrocytes Slc1a3 Plpp3 - Apoe | Astrocytes Slc1a3 Plpp3 - Cst3 | Dopaminergic Cck Hs3st4 - Ptprd | Dopaminergic Rxfp1 4933413l06rik - Pex5l | GABAergic Npy Erbb4 - Erbb4 | |
|---|---|---|---|---|---|
| Xkr4 | 1.0848248 | 1.1714033 | 2.7680306 | 3.9451423 | 5.2902240 |
| Gm1992 | 0.4413108 | 0.5016723 | 0.9104245 | 1.2229372 | 1.9764989 |
| Gm37381 | 0.0000000 | 0.0711501 | 0.0000000 | 0.0897211 | 0.0000000 |
| Rp1 | 0.1165463 | 0.0752031 | 0.0683943 | 0.0000000 | 0.1730269 |
| Sox17 | 0.2134944 | 0.2914689 | 0.0000000 | 0.0000000 | 0.0000000 |
| Astrocytes Slc1a3 Aqp4 - Clu | Astrocytes Slc1a3 Aqp4 - Slc1a2 | Cholinergic Calb1 Slc5a7 - Acly | Cholinergic Tacr1 Npy - Tacr1 | Endothelial Cldn5 Ly6c1 - Sparc | |
|---|---|---|---|---|---|
| Xkr4 | 0.0000000 | 0.0000000 | 0.0000000 | 0.000000 | 0.0421118 |
| Sox17 | 0.0000000 | 0.0000000 | 0.0000000 | 1.761456 | 1.9647710 |
| Mrpl15 | 0.0000000 | 0.9133879 | 0.7388574 | 3.035198 | 0.5635974 |
| Lypla1 | 0.9655279 | 0.7947375 | 0.0000000 | 4.204058 | 1.1343567 |
| Tcea1 | 1.2686132 | 1.9388918 | 0.7489950 | 4.482223 | 1.5668944 |
| Dopaminergic Adcyap1 Uncx - Ndn | Dopaminergic Adcyap1 Uncx - Pitx2 | Dopaminergic Lmx1a Uncx - Dmrta2 | Endothelial Cldn5 Igfbp7 - Sparc | GABAergic Npy Asic4 - Gata3 | |
|---|---|---|---|---|---|
| Xkr4 | 0.0000000 | 0.0000000 | 0.000000 | 0.000000 | 0.0973496 |
| Sox17 | 0.0000000 | 0.0000000 | 0.000000 | 1.989048 | 0.0000000 |
| Mrpl15 | 1.3528010 | 1.5724406 | 2.255019 | 2.333679 | 1.7855451 |
| Lypla1 | 0.9502086 | 0.2416054 | 0.435312 | 2.630886 | 1.0604708 |
| Gm37988 | 0.0000000 | 0.0000000 | 0.000000 | 0.000000 | 0.0000000 |
| Astrocytes Slc1a3 Gja1 - Atp1b2 | Astrocytes Slc1a3 Gja1 - Slc1a3 | Astrocytes Slc1a3 Gja1 - Slc6a11 | Endothelial Cldn5 Flt1 - Cldn5 | Endothelial Cldn5 Flt1 - Itm2a | |
|---|---|---|---|---|---|
| Xkr4 | 0.1478369 | 0.0000000 | 0.0000000 | 0.0389687 | 0.0426850 |
| Gm1992 | 0.0000000 | 0.0000000 | 0.0000000 | 0.0000000 | 0.0000000 |
| Rp1 | 0.0000000 | 0.0000000 | 0.0000000 | 0.0786196 | 0.0923171 |
| Sox17 | 0.0000000 | 0.0217464 | 0.0000000 | 3.4246754 | 2.6691677 |
| Mrpl15 | 0.4358399 | 0.5520658 | 0.4324584 | 0.6034894 | 0.8981087 |
| Astrocytes AGT CCL2 - AGT | Astrocytes AQP4 HEPN1 - AQP4 | GABAergic TAC3 DLX6-AS1 - SOX4 | Glutamatergic SSTR2 RP11-93H24.3 - TUBA4A | NPCs FOXG1 C4ORF32 - C11ORF96 | |
|---|---|---|---|---|---|
| RP11-34P13.3 | 0.0000000 | 0.000000 | 0.0000000 | 0.000000 | 0.0000000 |
| RP11-34P13.7 | 0.0000000 | 0.000000 | 0.0057023 | 0.000000 | 0.0000000 |
| FO538757.2 | 2.5167939 | 1.393544 | 1.2805036 | 2.050920 | 2.1861439 |
| AP006222.2 | 2.7259739 | 1.445707 | 0.5640264 | 1.171028 | 0.8439073 |
| RP4-669L17.10 | 0.0286725 | 0.000000 | 0.0053284 | 0.000000 | 0.0000000 |
| Cell_name | Function_gene | biological_process | cellular_component | molecular_function |
|---|---|---|---|---|
| Astrocytes Slc1a3 Hepacam - Apoe | APOE | cholesterol metabolic process | extracellular space | amyloid-beta binding |
| Astrocytes Slc1a3 Hepacam - Cst3 | CST3 | defense response | extracellular space | amyloid-beta binding |
| Astrocytes Slc1a3 Hepacam - Slc1a3 | SLC1A3 | L-amino acid transport | plasma membrane | organic acid:sodium symporter activity |
| Astrocytes Slc1a3 Mertk - Gpc5 | GPC5 | protein localization to membrane | cell surface | protein binding |
| Astrocytes Slc1a3 Plpp3 - Apoe | APOE | cholesterol metabolic process | extracellular space | amyloid-beta binding |
The analysis was performed by the non-profit and open-source AI/ML JSEQ/CSSG pipeline. More information is available on GitHub. In case of further questions, please contact us. The JSEQ® was created in the Department of Molecular Neurobiology, Institute of Bioorganic Chemistry, Polish Academy of Sciences.
Brain structures:
Human brain organoids: